itk::BloxCoreAtomPixel< NDimensions > Class Template Reference
[Image Representation Objects]

Holds a linked list of itk::BloxCoreAtomItem's. More...

#include <itkBloxCoreAtomPixel.h>

Inheritance diagram for itk::BloxCoreAtomPixel< NDimensions >:

[legend]Collaboration diagram for itk::BloxCoreAtomPixel< NDimensions >:

[legend]List of all members.

Public Types
typedef BloxCoreAtomPixel	Self
typedef BloxPixel< BloxCoreAtomItem< NDimensions > >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef BloxCoreAtomItem< NDimensions >	CoreAtomItemType
typedef BloxBoundaryPointItem< NDimensions >	BPItemType
typedef Point< double, NDimensions >	PositionType
typedef CovariantVector< double, NDimensions >	GradientType
typedef vnl_vector_fixed< double, NDimensions >	VectorType
typedef vnl_vector_fixed< double, NDimensions >	EigenvalueType
typedef vnl_matrix_fixed< double, NDimensions, NDimensions >	EigenvectorType
typedef vnl_matrix_fixed< double, NDimensions, NDimensions >	MatrixType
Public Member Functions
double	CalcMeanCoreAtomDiameter ()
bool	DoCoreAtomEigenanalysis ()
void	DoVotedEigenanalysis ()
MatrixType *	GetRawCMatrixPointer ()
void	CollectVote (MatrixType *pMatrix, double strength, double count)
void	NormalizeVotedCMatrix ()
void	CalcWeightedCoreAtomLocation (double weight_factor, Self *votingPixel)
void	CalcMeanCoreAtomIntensity ()
PositionType	GetVotedLocation ()
	BloxCoreAtomPixel ()
	~BloxCoreAtomPixel ()
double	GetMeanCoreAtomDiameter ()
double	GetMeanCoreAtomIntensity ()
EigenvalueType	GetEigenvalues ()
EigenvalueType	GetVotedEigenvalues ()
EigenvectorType	GetEigenvectors ()
EigenvectorType	GetVotedEigenvectors ()
PositionType	GetLocationSums ()
double	GetWeightSum ()

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Detailed Description

template<unsigned int NDimensions>
class itk::BloxCoreAtomPixel< NDimensions >

Holds a linked list of itk::BloxCoreAtomItem's.

Definition at line 42 of file itkBloxCoreAtomPixel.h.

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Member Typedef Documentation

template<unsigned int NDimensions> typedef BloxBoundaryPointItem<NDimensions> itk::BloxCoreAtomPixel< NDimensions >::BPItemType

The type of boundary point item we process. Definition at line 56 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> typedef SmartPointer<const Self> itk::BloxCoreAtomPixel< NDimensions >::ConstPointer

Definition at line 50 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> typedef BloxCoreAtomItem<NDimensions> itk::BloxCoreAtomPixel< NDimensions >::CoreAtomItemType

The type of core atom item we process. Definition at line 53 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> typedef vnl_vector_fixed<double, NDimensions> itk::BloxCoreAtomPixel< NDimensions >::EigenvalueType

Vector type used to store eigenvalues. Definition at line 68 of file itkBloxCoreAtomPixel.h. Referenced by itk::BloxCoreAtomPixel< NDimensions >::GetEigenvalues(), itk::BloxCoreAtomPixel< NDimensions >::GetRawCMatrixPointer(), and itk::BloxCoreAtomPixel< NDimensions >::GetVotedEigenvalues().

template<unsigned int NDimensions> typedef vnl_matrix_fixed<double, NDimensions, NDimensions> itk::BloxCoreAtomPixel< NDimensions >::EigenvectorType

Matrix type used to store eigenvectors. Definition at line 71 of file itkBloxCoreAtomPixel.h. Referenced by itk::BloxCoreAtomPixel< NDimensions >::GetEigenvectors(), itk::BloxCoreAtomPixel< NDimensions >::GetRawCMatrixPointer(), and itk::BloxCoreAtomPixel< NDimensions >::GetVotedEigenvectors().

template<unsigned int NDimensions> typedef CovariantVector<double, NDimensions> itk::BloxCoreAtomPixel< NDimensions >::GradientType

The type of vector used to store the gradient of the BoundaryPointItem. Definition at line 62 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> typedef vnl_matrix_fixed<double, NDimensions, NDimensions> itk::BloxCoreAtomPixel< NDimensions >::MatrixType

Generalized matrix type used for several different tasks Definition at line 74 of file itkBloxCoreAtomPixel.h. Referenced by itk::BloxCoreAtomPixel< NDimensions >::GetRawCMatrixPointer().

template<unsigned int NDimensions> typedef SmartPointer<Self> itk::BloxCoreAtomPixel< NDimensions >::Pointer

Definition at line 49 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> typedef Point<double, NDimensions> itk::BloxCoreAtomPixel< NDimensions >::PositionType

The type used to store the position of the BoundaryPointItem. Definition at line 59 of file itkBloxCoreAtomPixel.h. Referenced by itk::BloxCoreAtomPixel< NDimensions >::GetLocationSums(), and itk::BloxCoreAtomPixel< NDimensions >::GetRawCMatrixPointer().

template<unsigned int NDimensions> typedef BloxCoreAtomPixel itk::BloxCoreAtomPixel< NDimensions >::Self

Standard class typedefs. Definition at line 47 of file itkBloxCoreAtomPixel.h. Referenced by itk::BloxCoreAtomPixel< NDimensions >::GetRawCMatrixPointer().

template<unsigned int NDimensions> typedef BloxPixel< BloxCoreAtomItem<NDimensions> > itk::BloxCoreAtomPixel< NDimensions >::Superclass

Definition at line 48 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> typedef vnl_vector_fixed<double, NDimensions> itk::BloxCoreAtomPixel< NDimensions >::VectorType

VNL type used in eigenanalysis. Definition at line 65 of file itkBloxCoreAtomPixel.h.

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Constructor & Destructor Documentation

template<unsigned int NDimensions> itk::BloxCoreAtomPixel< NDimensions >::BloxCoreAtomPixel (   )

template<unsigned int NDimensions> itk::BloxCoreAtomPixel< NDimensions >::~BloxCoreAtomPixel (   )

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Member Function Documentation

template<unsigned int NDimensions> double itk::BloxCoreAtomPixel< NDimensions >::CalcMeanCoreAtomDiameter (   )

Calculate and store the mean of core atom diameters.

template<unsigned int NDimensions> void itk::BloxCoreAtomPixel< NDimensions >::CalcMeanCoreAtomIntensity (   )

Calculate mean intensity os the pixel based on its core atoms

template<unsigned int NDimensions> void itk::BloxCoreAtomPixel< NDimensions >::CalcWeightedCoreAtomLocation (  double  weight_factor, Self *  votingPixel )

Calculate location of the pixel based on core atoms voting for it

template<unsigned int NDimensions> void itk::BloxCoreAtomPixel< NDimensions >::CollectVote (  MatrixType *  pMatrix, double  strength, double  count )

Collect a vote and update m_VotedCMatrix

template<unsigned int NDimensions> bool itk::BloxCoreAtomPixel< NDimensions >::DoCoreAtomEigenanalysis (   )

Perform eigenanalysis on the population of core atoms stored in this pixel.

template<unsigned int NDimensions> void itk::BloxCoreAtomPixel< NDimensions >::DoVotedEigenanalysis (   )

Perform eigenanalysis on the voted CMatrix

template<unsigned int NDimensions> EigenvalueType itk::BloxCoreAtomPixel< NDimensions >::GetEigenvalues (   )  [inline]

Get statements Definition at line 88 of file itkBloxCoreAtomPixel.h. References itk::BloxCoreAtomPixel< NDimensions >::EigenvalueType.

template<unsigned int NDimensions> EigenvectorType itk::BloxCoreAtomPixel< NDimensions >::GetEigenvectors (   )  [inline]

Get statements Definition at line 90 of file itkBloxCoreAtomPixel.h. References itk::BloxCoreAtomPixel< NDimensions >::EigenvectorType.

template<unsigned int NDimensions> PositionType itk::BloxCoreAtomPixel< NDimensions >::GetLocationSums (   )  [inline]

Get statements Definition at line 92 of file itkBloxCoreAtomPixel.h. References itk::BloxCoreAtomPixel< NDimensions >::PositionType.

template<unsigned int NDimensions> double itk::BloxCoreAtomPixel< NDimensions >::GetMeanCoreAtomDiameter (   )  [inline]

Get statements Definition at line 86 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> double itk::BloxCoreAtomPixel< NDimensions >::GetMeanCoreAtomIntensity (   )  [inline]

Get statements Definition at line 87 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> MatrixType* itk::BloxCoreAtomPixel< NDimensions >::GetRawCMatrixPointer (   )  [inline]

Get the raw CMatrix (prior to voting) Definition at line 97 of file itkBloxCoreAtomPixel.h. References itk::BloxCoreAtomPixel< NDimensions >::EigenvalueType, itk::BloxCoreAtomPixel< NDimensions >::EigenvectorType, itk::BloxCoreAtomPixel< NDimensions >::MatrixType, itk::BloxCoreAtomPixel< NDimensions >::PositionType, and itk::BloxCoreAtomPixel< NDimensions >::Self.

template<unsigned int NDimensions> EigenvalueType itk::BloxCoreAtomPixel< NDimensions >::GetVotedEigenvalues (   )  [inline]

Get statements Definition at line 89 of file itkBloxCoreAtomPixel.h. References itk::BloxCoreAtomPixel< NDimensions >::EigenvalueType.

template<unsigned int NDimensions> EigenvectorType itk::BloxCoreAtomPixel< NDimensions >::GetVotedEigenvectors (   )  [inline]

Get statements Definition at line 91 of file itkBloxCoreAtomPixel.h. References itk::BloxCoreAtomPixel< NDimensions >::EigenvectorType.

template<unsigned int NDimensions> PositionType itk::BloxCoreAtomPixel< NDimensions >::GetVotedLocation (   )

Returns the calculated voted location

template<unsigned int NDimensions> double itk::BloxCoreAtomPixel< NDimensions >::GetWeightSum (   )  [inline]

Get statements Definition at line 93 of file itkBloxCoreAtomPixel.h.

template<unsigned int NDimensions> void itk::BloxCoreAtomPixel< NDimensions >::NormalizeVotedCMatrix (   )

Re-normalizes the voted CMatrix after all votes are cast

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The documentation for this class was generated from the following file:

• itkBloxCoreAtomPixel.h

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