itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage > Class Template Reference
[Image Enhancement Filters]

Converts a BloxImage of BloxBoundaryPoints to a BloxImage of BloxBoundaryProfiles. More...

#include <itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h>

Inheritance diagram for itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >:

[legend]Collaboration diagram for itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >:

[legend]List of all members.

Public Types
typedef BloxBoundaryPointImageToBloxBoundaryProfileImageFilter	Self
typedef ImageToImageFilter< TSourceImage, BloxBoundaryProfileImage< itkGetStaticConstMacro(NDimensions)>	Superclass )
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef BloxBoundaryPointImage< itkGetStaticConstMacro(NDimensions)	BoundaryPointImageType )
typedef BoundaryPointImageType::Pointer	BoundaryPointImagePointer
typedef BoundaryPointImageType::RegionType	BoundaryPointImageRegionType
typedef BoundaryPointImageType::PixelType	BoundaryPointImagePixelType
typedef BoundaryPointImageType::ConstPointer	BoundaryPointImageConstPointer
typedef TSourceImage	SourceImageType
typedef SourceImageType::Pointer	SourceImagePointer
typedef SourceImageType::RegionType	SourceImageRegionType
typedef SourceImageType::PixelType	SourceImagePixelType
typedef SourceImageType::ConstPointer	SourceImageConstPointer
typedef BloxBoundaryProfileImage< itkGetStaticConstMacro(NDimensions)	OutputImageType )
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef OutputImageType::PixelType	OutputImagePixelType
typedef BloxBoundaryProfileImage< itkGetStaticConstMacro(NDimensions)>::IndexTyp	IndexType )
typedef BloxBoundaryProfileImage< itkGetStaticConstMacro(NDimensions)>::PixelTyp	PixelType )
typedef Point< double, itkGetStaticConstMacro(NDimensions)	PositionType )
typedef PositionType::VectorType	VectorType
Public Member Functions
	itkStaticConstMacro (NDimensions, unsigned int, TSourceImage::ImageDimension)
virtual const char *	GetNameOfClass () const
void	SetInput1 (const SourceImageType *image1)
void	SetInput2 (const BoundaryPointImageType *image2)
double	FindAccumulatorMaximum ()
double	FindAccumulatorMinimum ()
void	FindBoundaryProfiles ()
bool	AddSplatToAccumulatorAndNormalizer (int binNumber, double weight, double sourcePixelValue)
void	NormalizeSplatAccumulator ()
int	FitProfile ()
void	Initialize (double setUniqueAxis, double setSymmetricAxes, unsigned int numberOfBins, unsigned int splatMethod, unsigned int spaceDimension)
Static Public Member Functions
Pointer	New ()
Protected Member Functions
	BloxBoundaryPointImageToBloxBoundaryProfileImageFilter ()
	~BloxBoundaryPointImageToBloxBoundaryProfileImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
void	GenerateData ()

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Detailed Description

template<typename TSourceImage>
class itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >

Converts a BloxImage of BloxBoundaryPoints to a BloxImage of BloxBoundaryProfiles.

Samples the BloxBoundaryPointImage to form a BloxBoundaryProfileImage by sampling voxels in an ellipsoidal region, where the center of the ellipoid is the location of each boundary point. Voxels within these regions are splatted onto the major axis of the ellipsoid in bins to form a profile of average intensity traversing blurred boundaries. Using curve fitting techniques, a cumulative Gaussian is fit to this intensity profile to yield estimates of actual boundary location, intensities on both sides of the boundary, and blurred boundary width.

References: Robert J. Tamburo, George D. Stetten: Gradient-Oriented Profiles for Boundary Parameterization and Their Application to Core Atoms Towards Shape Analysis. International Journal of Image and Graphics 1(4): 659-680 (2001)

Robert J.Tamburo and George D.Stetten,M.D.,Ph.D.: Gradient-Oriented Profiles for Unsupervised Boundary Classification. Proceedings of the 29th Applied Imagery Pattern Recognition Workshop. October 2000: Washington, D.C.

Definition at line 55 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

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Member Typedef Documentation

template<typename TSourceImage> typedef BoundaryPointImageType::ConstPointer itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::BoundaryPointImageConstPointer

Definition at line 79 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BoundaryPointImageType::PixelType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::BoundaryPointImagePixelType

Definition at line 78 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BoundaryPointImageType::Pointer itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::BoundaryPointImagePointer

Definition at line 76 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BoundaryPointImageType::RegionType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::BoundaryPointImageRegionType

Definition at line 77 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BloxBoundaryPointImage<itkGetStaticConstMacro(NDimensions) itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::BoundaryPointImageType)

Typedef for boundary point image Definition at line 75 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef SmartPointer<const Self> itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::ConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Definition at line 66 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BloxBoundaryProfileImage<itkGetStaticConstMacro(NDimensions)>::IndexTyp itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::IndexType)

Image index typedef Definition at line 95 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef OutputImageType::PixelType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::OutputImagePixelType

Reimplemented from itk::ImageSource< TOutputImage >. Definition at line 92 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef OutputImageType::Pointer itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::OutputImagePointer

Reimplemented from itk::ImageSource< TOutputImage >. Definition at line 90 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef OutputImageType::RegionType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::OutputImageRegionType

Superclass typedefs. Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Definition at line 91 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BloxBoundaryProfileImage<itkGetStaticConstMacro(NDimensions) itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::OutputImageType)

Typedef for profile image Reimplemented from itk::ImageSource< TOutputImage >. Definition at line 89 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BloxBoundaryProfileImage<itkGetStaticConstMacro(NDimensions)>::PixelTyp itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::PixelType)

Image pixel value typedef Definition at line 98 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef SmartPointer<Self> itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::Pointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Definition at line 65 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef Point<double, itkGetStaticConstMacro(NDimensions) itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::PositionType)

The type of vector used to convert between physical and blox space Definition at line 101 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef BloxBoundaryPointImageToBloxBoundaryProfileImageFilter itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::Self

Standard class typedefs Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Definition at line 63 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef SourceImageType::ConstPointer itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SourceImageConstPointer

Definition at line 86 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef SourceImageType::PixelType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SourceImagePixelType

Definition at line 85 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef SourceImageType::Pointer itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SourceImagePointer

Definition at line 83 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef SourceImageType::RegionType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SourceImageRegionType

Definition at line 84 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef TSourceImage itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SourceImageType

Typedef for blurred source image Definition at line 82 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef ImageToImageFilter<TSourceImage,BloxBoundaryProfileImage<itkGetStaticConstMacro(NDimensions)> itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::Superclass)

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >. Definition at line 64 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

template<typename TSourceImage> typedef PositionType::VectorType itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::VectorType

Vector typedef Definition at line 104 of file itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h.

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Constructor & Destructor Documentation

template<typename TSourceImage> itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter (   )  [protected]

template<typename TSourceImage> itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::~BloxBoundaryPointImageToBloxBoundaryProfileImageFilter (   )  [protected]

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Member Function Documentation

template<typename TSourceImage> bool itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::AddSplatToAccumulatorAndNormalizer (  int  binNumber, double  weight, double  sourcePixelValue )

Add weighted pixel value to appropriate bin number in splat accumulator and normalizer

template<typename TSourceImage> double itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::FindAccumulatorMaximum (   )

Find maximum in accumulator

template<typename TSourceImage> double itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::FindAccumulatorMinimum (   )

Find minimum in accumulator

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::FindBoundaryProfiles (   )

Find boundary profiles from input images and store them

template<typename TSourceImage> int itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::FitProfile (   )

Fit the boundary profile to a cumulative Gaussian

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::GenerateData (   )  [protected, virtual]

Method for forming the BloxBoundaryProfileImage Reimplemented from itk::ImageSource< TOutputImage >.

template<typename TSourceImage> virtual const char* itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::GetNameOfClass (   )  const [virtual]

Run-time type information (and related methods) Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::Initialize (  double  setUniqueAxis, double  setSymmetricAxes, unsigned int  numberOfBins, unsigned int  splatMethod, unsigned int  spaceDimension )

Parameters required to find boundary profiles

template<typename TSourceImage> itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::itkStaticConstMacro (  NDimensions  , unsigned  int, TSourceImage::ImageDimension  )

Number of dimensions

template<typename TSourceImage> Pointer itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::New (   )  [static]

Method for creation through the object factory Reimplemented from itk::Object.

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::NormalizeSplatAccumulator (   )

Normalize the splat accumulator by the normalizer

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::PrintSelf (  std::ostream &  os, Indent  indent )  const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes. Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SetInput1 (  const SourceImageType *  image1  )

Set the blurred original image

template<typename TSourceImage> void itk::BloxBoundaryPointImageToBloxBoundaryProfileImageFilter< TSourceImage >::SetInput2 (  const BoundaryPointImageType *  image2  )

Set the boundary point image

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The documentation for this class was generated from the following file:

• itkBloxBoundaryPointImageToBloxBoundaryProfileImageFilter.h

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