itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh > Class Template Reference

This filter changes the topology of a 2-simplex mesh. More...

#include <itkSimplexMeshAdaptTopologyFilter.h>

Inheritance diagram for itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >:

[legend]Collaboration diagram for itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >:

[legend]List of all members.

Public Types
typedef SimplexMeshAdaptTopologyFilter	Self
typedef MeshToMeshFilter< TInputMesh, TOutputMesh >	Superclass
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< const Self >	ConstPointer
typedef TInputMesh	InputMeshType
typedef InputMeshType::Pointer	InputMeshPointer
typedef InputMeshType::PointType	InputPointType
typedef InputMeshType::VectorType	InputVectorType
typedef InputMeshType::PixelType	InputPixelType
typedef InputMeshType::MeshTraits::CellTraits	InputCellTraitsType
typedef InputMeshType::CellType	InputCellType
typedef InputCellType::PointIdIterator	InputCellPointIdIterator
typedef InputCellType::CellAutoPointer	InputCellAutoPointer
typedef InputMeshType::CellAutoPointer	CellAutoPointer
typedef itk::PolygonCell< InputCellType >	InputPolygonType
typedef InputPolygonType::PointIdIterator	InputPolygonPointIdIterator
typedef TOutputMesh	OutputMeshType
typedef OutputMeshType::Pointer	OutputMeshPointer
typedef OutputMeshType::CellType	OutputCellType
typedef itk::PolygonCell< OutputCellType >	OutputPolygonType
typedef itk::MapContainer< unsigned long, double >	DoubleValueMapType
typedef DoubleValueMapType::Iterator	DoubleContainerIterator
typedef itk::CellInterfaceVisitorImplementation< InputPixelType, InputCellTraitsType, InputPolygonType, SimplexCellVisitor >	SimplexVisitorInterfaceType
typedef SimplexVisitorInterfaceType::Pointer	SimplexVisitorInterfacePointer
typedef InputCellType::MultiVisitor	CellMultiVisitorType
typedef CellMultiVisitorType::Pointer	CellMultiVisitorPointer
Public Member Functions
virtual const char *	GetNameOfClass () const
virtual void	SetThreshold (double _arg)
virtual double	GetThreshold ()
virtual void	SetSelectionMethod (int _arg)
virtual int	GetSelectionMethod ()
virtual int	GetModifiedCount ()
Static Public Member Functions
Pointer	New ()
Protected Member Functions
	SimplexMeshAdaptTopologyFilter ()
	~SimplexMeshAdaptTopologyFilter ()
	SimplexMeshAdaptTopologyFilter (const Self &)
void	operator= (const Self &)
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	GenerateData ()
void	Initialize ()
void	ComputeCellParameters ()
void	InsertNewCells ()
void	ModifyNeighborCells (unsigned long id1, unsigned long id2, unsigned long insertPointId)
InputPointType	ComputeCellCenter (InputCellAutoPointer &simplexCell)
Protected Attributes
unsigned long	m_IdOffset
double	m_Threshold
int	m_SelectionMethod
int	m_ModifiedCount
OutputMeshPointer	m_Output
InputCellAutoPointer	NewSimplexCellPointer

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Detailed Description

template<class TInputMesh, class TOutputMesh>
class itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >

This filter changes the topology of a 2-simplex mesh.

Currently only one transformation for inserting new cells into a mesh is implemented. For insertion several criteria are compute, e.g. the curvature in a mesh point. The user can set a threshold value to control how many cells will be manipulated.

Author:

Thomas Boettger. Division Medical and Biological Informatics, German Cancer Research Center, Heidelberg.

Definition at line 51 of file itkSimplexMeshAdaptTopologyFilter.h.

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Member Typedef Documentation

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::CellAutoPointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::CellAutoPointer

Definition at line 82 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef CellMultiVisitorType::Pointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::CellMultiVisitorPointer

Definition at line 235 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputCellType::MultiVisitor itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::CellMultiVisitorType

Definition at line 234 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef SmartPointer<const Self> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::ConstPointer

Smart pointer typedef support Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 65 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef DoubleValueMapType::Iterator itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::DoubleContainerIterator

Definition at line 93 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef itk::MapContainer<unsigned long, double> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::DoubleValueMapType

Definition at line 92 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputCellType::CellAutoPointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputCellAutoPointer

Definition at line 81 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputCellType::PointIdIterator itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputCellPointIdIterator

Definition at line 80 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::MeshTraits::CellTraits itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputCellTraitsType

Definition at line 78 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::CellType itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputCellType

Definition at line 79 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::Pointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputMeshPointer

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 74 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef TInputMesh itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputMeshType

Some convenient typedefs. Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 73 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::PixelType itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputPixelType

Definition at line 77 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::PointType itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputPointType

Definition at line 75 of file itkSimplexMeshAdaptTopologyFilter.h. Referenced by itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexCellVisitor::ComputeArea().

template<class TInputMesh, class TOutputMesh> typedef InputPolygonType::PointIdIterator itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputPolygonPointIdIterator

Definition at line 84 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef itk::PolygonCell<InputCellType> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputPolygonType

Definition at line 83 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef InputMeshType::VectorType itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InputVectorType

Definition at line 76 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef OutputMeshType::CellType itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::OutputCellType

Definition at line 89 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef OutputMeshType::Pointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::OutputMeshPointer

Reimplemented from itk::MeshSource< TOutputMesh >. Definition at line 88 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef TOutputMesh itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::OutputMeshType

Reimplemented from itk::MeshSource< TOutputMesh >. Definition at line 87 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef itk::PolygonCell<OutputCellType> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::OutputPolygonType

Definition at line 90 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef SmartPointer<Self> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::Pointer

Smart pointer typedef support Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 62 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef SimplexMeshAdaptTopologyFilter itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::Self

Standard "Self" typedef. Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 56 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef SimplexVisitorInterfaceType::Pointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexVisitorInterfacePointer

Definition at line 233 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef itk::CellInterfaceVisitorImplementation<InputPixelType, InputCellTraitsType, InputPolygonType, SimplexCellVisitor> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexVisitorInterfaceType

Definition at line 231 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> typedef MeshToMeshFilter<TInputMesh, TOutputMesh> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::Superclass

Standard "Superclass" typedef. Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 59 of file itkSimplexMeshAdaptTopologyFilter.h.

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Constructor & Destructor Documentation

template<class TInputMesh, class TOutputMesh> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexMeshAdaptTopologyFilter (   )  [protected]

template<class TInputMesh, class TOutputMesh> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::~SimplexMeshAdaptTopologyFilter (   )  [protected]

template<class TInputMesh, class TOutputMesh> itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexMeshAdaptTopologyFilter (  const Self &   )  [inline, protected]

Definition at line 253 of file itkSimplexMeshAdaptTopologyFilter.h.

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Member Function Documentation

template<class TInputMesh, class TOutputMesh> InputPointType itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::ComputeCellCenter (  InputCellAutoPointer &  simplexCell  )  [protected]

Compute the center of a cell

template<class TInputMesh, class TOutputMesh> void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::ComputeCellParameters (   )  [protected]

Method computes and evaluates cell propeties, like area and curvature and determines whether a cell should be refined or not.

template<class TInputMesh, class TOutputMesh> virtual void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::GenerateData (  void   )  [protected, virtual]

This method causes the filter to generate its output. Reimplemented from itk::ProcessObject.

template<class TInputMesh, class TOutputMesh> virtual int itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::GetModifiedCount (   )  [virtual]

template<class TInputMesh, class TOutputMesh> virtual const char* itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::GetNameOfClass (   )  const [virtual]

Run-time type information (and related methods). Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh, class TOutputMesh> virtual int itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::GetSelectionMethod (   )  [virtual]

template<class TInputMesh, class TOutputMesh> virtual double itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::GetThreshold (   )  [virtual]

template<class TInputMesh, class TOutputMesh> void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::Initialize (   )  [protected]

Initialize this filters containers

template<class TInputMesh, class TOutputMesh> void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::InsertNewCells (   )  [protected]

Create new cells

template<class TInputMesh, class TOutputMesh> void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::ModifyNeighborCells (  unsigned long  id1, unsigned long  id2, unsigned long  insertPointId )  [protected]

Update topology neighbor relations for all cells which are were influenced by he insertion of new points.

template<class TInputMesh, class TOutputMesh> Pointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::New (   )  [static]

Method of creation through the object factory. Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh, class TOutputMesh> void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::operator= (  const Self &   )  [inline, protected]

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >. Definition at line 257 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::PrintSelf (  std::ostream &  os, Indent  indent )  const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes. Reimplemented from itk::MeshSource< TOutputMesh >.

template<class TInputMesh, class TOutputMesh> virtual void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SetSelectionMethod (  int  _arg  )  [virtual]

template<class TInputMesh, class TOutputMesh> virtual void itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SetThreshold (  double  _arg  )  [virtual]

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Member Data Documentation

template<class TInputMesh, class TOutputMesh> unsigned long itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::m_IdOffset [protected]

class member stoing cell id offset Definition at line 300 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> int itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::m_ModifiedCount [protected]

atttribute contains the number of cells which were modified during the last Update() Definition at line 318 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> OutputMeshPointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::m_Output [protected]

member for accessing the filter result during creation Definition at line 324 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> int itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::m_SelectionMethod [protected]

different criteria for cell refinement selection Definition at line 312 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> double itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::m_Threshold [protected]

threshold controls the percentage of cells to satify the selection criteria Definition at line 307 of file itkSimplexMeshAdaptTopologyFilter.h.

template<class TInputMesh, class TOutputMesh> InputCellAutoPointer itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::NewSimplexCellPointer [protected]

Definition at line 326 of file itkSimplexMeshAdaptTopologyFilter.h.

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The documentation for this class was generated from the following file:

• itkSimplexMeshAdaptTopologyFilter.h

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