Virtual Laboratory for e-Science
The Proof-of-Concept Environment

Proposed PoC R2 distribution content

The following list is a proposed list of packages for the upcoming PoC R2 distribution.

Package	R1 Version	R2 Version	Web site
Java SDK	1.4.2	1.4.2	http://java.sun.com
		1.5.0
DeVIDE	--	ng1phase1 6.8.7T	http://visualisation.tudelft.nl/Projects/DeVIDE
FSL	3.2	3.3	http://www.fmrib.ox.ac.uk/fsl
GAT	1.8.2	1.8.2	http://www.gridlab.org/WorkPackages/wp-1/gatreleases.html
JavaGAT	1.5	1.6	https://gforge.cs.vu.nl/projects/javagat
MatlabMPI	1.2	1.2	http://www.ll.mit.edu/MatlabMPI
Mesa3D	6.4.1	6.5.1 6.4.2	http://www.mesa3d.org
R	2.2.0	2.4.0	http://www.r-project.org
Rmpi	0.5	0.5-3	http://www.stats.uwo.ca/faculty/yu/Rmpi
SRB	3.4.0	3.4.2	http://www.sdsc.edu/srb
VRX	--	??	http://visualisation.tudelft.nl/Projects
ant	1.6.2	1.6.2	http://ant.apache.org
globus-toolkit	4.0.1	4.0.3	http://www-unix.globus.org/toolkit
graphviz	2.8	2.9 2.8	http://www.graphviz.org
ibis	1.2.1	1.4	http://www.cs.vu.nl/ibis
itk	2.4.1	2.8.1	http://www.itk.org
kepler	1.0.0alpha7	1.0.0beta2	http://kepler-project.org
lam	7.1.2	7.1.2	http://www.lam-mpi.org
lucene	1.4.3	1.4.3	http://lucene.apache.org/
medline	1.0	1.0	http://www.few.vu.nl
modules	--	3.2.3	http://modules.sf.net
mpitb	2.1.72	2.9.9 2.1.72	http://atc.ugr.es/javier-bin/mpitb
mricro	1.3.9	1.40build1	http://www.sph.sc.edu/comd/rorden/mricro.html
nimrod/G	3.0.1	3.0.1	http://www.csse.monash.edu.au/~nimrod
nimrod/O	--	3.0.1	http://www.csse.monash.edu.au/~nimrod
octave	2.1.72	2.9.9 2.1.72	http://www.octave.org
ogsadai-wsrf	2.1	2.2	http://www.ogsadai.org.uk
paraview	2.4.2	2.4.4	http://www.paraview.org
swi-prolog (pl)	5.6.4	5.6.22	http://www.swi-prolog.org
sesame-client	1.2.3	1.2.5	http://www.openrdf.org
taverna-workbench	1.3.1	1.4	http://taverna.sf.net
triana	3.2	DROPPED	http://www.trianacode.org
vlet/vbrowser	--	0.6/1.0	http://poc.vl-e.nl
vl-e	1.0	2.0	http://poc.vl-e.nl
vtk	4.4	5.0.2	http://public.kitware.com/VTK
weka	--	3.4.8a	http://www.cs.waikato.ac.nz/ml/weka